منابع مشابه
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There is a lack of software engineering skills in bioinformatic contexts. We discuss the consequences of this lack, examine existing explanations and remedies to the problem, point out their shortcomings, and propose alternatives. Previous analyses of the problem have tended to treat the use of software in scientific contexts as categorically different from the general application of software e...
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In recent years, an increasing number of Chemical Engineering Software (CES), which play an important role in improving efficiency in the petroleum industry, has been introduced to the market. Generally, software is the product of intellectual creativity, but protection of the intellectual property residing in software is the subject of some controversy. This paper explores the ...
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Two softwares used for sequence alignment and searches are BioJava and BioPerl Comparison between these two tolls is shown. There are several software engineering issues such as software reuse, component-based software engineering, cleanroom engineering. We are discussing here software reuse (reusable objects). What kind and amount of bimolecular data is available and how to encode that data an...
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In this chapter we address several SE and KE issues in bioinformatics. We review and compare two most widely used bioinformatics tools for sequence alignment and searches. Then, we address the need of background knowledge for processing biomolecular data. Next, we discuss the design and status of a bioinformatics infrastructure, called Genome Mining, developed in our lab. Finally, we conclude t...
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Bioinformatics has published papers describing new software for over 20 years (Nilsson and Klein 1985). During this time the world of software has changed considerably particularly with the irresistible rise of initiatives to build freely accessible software as has opening access to data resources. The Internet and the Web have also changed the way we use and distribute software. This social an...
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ژورنال
عنوان ژورنال: Journal of Statistical Software
سال: 2005
ISSN: 1548-7660
DOI: 10.18637/jss.v012.b04